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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825970.1_cds_XP_016502522.1_16154
CDS Infomation

[gene=LOC107820702] [db_xref=GeneID:107820702] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 isoform X2] [protein_id=XP_016502522.1] [location=complement(join(42747..43085,43389..43842,43929..44109,44237..45548))] [gbkey=CDS]
Sequence

ATGTTGATGGACAGAGGCACCACTGTATGGGCATCAAACACCTCAGAAGCTGGCGTTGAG
ACAGCTGTCATGTCTGAAAATGGAAACTTCATTCTCTATGCCGACAACCTAAGCATTGTA
TGGCAGAGCTTTTCACATCCATCAGATACTCTATTGCCTGGCCAACCTTTAACAGTGTCA
GTAGAACTAACATCATCAAAATCACCTTCCCCCGGAGGTTATTACACGTTAAAAATGTTG
CAGCAGCCCACCTCACTAAACCTAGCATTGACCTACAATGTGCCTGAGTCCTATCATATG
TCACCTGAATTGTATAGCAATTATTCTTACTGGTCAGGACCTGATATATCAAATGTGACA
GGAGATGTTGTTGCAGTCTTGGATAAAGCTGGAAGCTTTGGTATGGTTTATGGATCGTCT
TCGGATGGAGCAGTTTATGTGTACAAAAATGATGGTGATTATGGAGGGCTATTCTCGGCT
GTGAATCAATCTAATGATTGGAGTAGACCATCTGTTTTTCGAAGGTTAATTCTTGAGGGT
AATGGAAATCTACGTCTGTATCGATGGGACAACGATGTGAATGGATCGAGGCAATGGGTT
GCAGAGTGGGCAGCTGTGTCCAATCCATGTGGCATTGCTGGAATTTGTGGCAATGGGATT
TGTAATTTAGACAGAAGTAAAACGAATGCTTCTTGCACATGCTTACCAGGCACTTCTAAG
GTGGGAAATGTTATCTCGTGTTCTGGAAATTCTTCATTGACAGGGAAATGTGGACCTCAT
CATGAAAATTTGACTTCCGAGTTCAAGATTTCTACAGTTCAACAAACTGCTTACTATTTC
TCAGGATCATCTGTTATAGCAAATTATAGTGATATAGAGTCAGTGTCCAAATGTGGGAAT
GCTTGCTTATCAAATTGTGATTGTGTTGCTTCTGTTTATGGTCTTAGTGAGGAAAAGCCT
TATTGTTGGGTCCTAAGAAACTTGGAATTTGGTGGATTCGAGGATCCTGGCTCAACTCTA
TTCGTGAAGGTCGAGGCTAATGGCTCATTTGGAGTGAGTGGTGATAAACAAACTGGGAAT
TCATCAGACGAATCGCAGAGTACACGCGATAAAGTTTTGATACTTCCTATAGTCCTAAGT
ATGACAGTTCTCATCGCGCTACTTGGTTGTCTGTTATATATCAATATCCATAGAAAAAGA
TCCTTAAAGAGAGCTATTGAGGGCTCTTTGATCTTATCAGGAGCTCCGATTAGTTTCAGC
TACCGTGACTTGCAACACCGGACTAACAATTTTTCCGAGTTACTTGGAACAGGTGGATTT
GGCAGTGTATACAAGGGAAGCCTAGGGGATGGAACATTGATTGCAGTAAAGAAGCTTGGC
AAAGTTTTACCTCATGGGGAAAGGGAATTTATAACAGAGGTCAACACCATTGGCTCTATG
CATCATATGAACTTGGTTCGTCTATGCGGATACTGTTCTGAGGGAACACGAAGGCTACTA
GTATATGAGTTCATGAAAAATGGCTCACTGGACAAGTGGATATTTCATTCATATAGTAAC
AGAGATAGACTGCTAGTTTGGCCTACACGTTTCCGCATAGCCATTGCTACTGCACAAGGG
ATTGCCTATTTTCATGAGCAATGCAGGAATAGAATAATACACTGCGACATCAAGCCAGAG
AACATACTTTTGGATGAGAATTTCTGTCCTAAAGTTTCTGATTTTGGACTAGCTAAATTG
ATGGGGAGAGAGCATTCCCATGTTGTCACTATGGTCCGAGGAACCAGAGGTTATTTAGCC
CCCGAGTGGGTCAGCAACCGACCCATAACTGTAAAAGCTGATGTTTACAGCTATGGAATG
CTGCTGCTAGAAATCGTTGGTGGTCGAAGAAATCTTGATATGACTTGTGATGCTGAGGAC
TTCTTTTACCCTGGATGGGCTTACAAGGAAATGAGCGAAGGAACGGCAGAAAAGGTTGTT
GATAGACGACTTGAAGGAGCAATGGAAAAAGAAGAGCTAATGAGAGCTTTAATGGTAGCC
TTTTGGTGTATTCAGGATGAGGTTTCGACAAGGCCTACGATGGGGGAAGTGGTGAAGATG
TTGGAAGGATCAGTTGACATTAATATGCCTCCAATGCCACAGACAGTTTTAGAGCTAATA
GAAGAAGGCTTAGATCATGTATACAGATCTATGAAAAGGGAGCTCAATCAATTCAGTTCC
TTTACTATTACTACTCATCCATCATCTAATGCTACATGTAGTTACTCCACAATGTCACCT
AGATAG

Peptide Sequence

PEP ID

XP_016502522.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 isoform X2 [Nicotiana tabacum]
Sequence

MLMDRGTTVWASNTSEAGVETAVMSENGNFILYADNLSIVWQSFSHPSDTLLPGQPLTVS
VELTSSKSPSPGGYYTLKMLQQPTSLNLALTYNVPESYHMSPELYSNYSYWSGPDISNVT
GDVVAVLDKAGSFGMVYGSSSDGAVYVYKNDGDYGGLFSAVNQSNDWSRPSVFRRLILEG
NGNLRLYRWDNDVNGSRQWVAEWAAVSNPCGIAGICGNGICNLDRSKTNASCTCLPGTSK
VGNVISCSGNSSLTGKCGPHHENLTSEFKISTVQQTAYYFSGSSVIANYSDIESVSKCGN
ACLSNCDCVASVYGLSEEKPYCWVLRNLEFGGFEDPGSTLFVKVEANGSFGVSGDKQTGN
SSDESQSTRDKVLILPIVLSMTVLIALLGCLLYINIHRKRSLKRAIEGSLILSGAPISFS
YRDLQHRTNNFSELLGTGGFGSVYKGSLGDGTLIAVKKLGKVLPHGEREFITEVNTIGSM
HHMNLVRLCGYCSEGTRRLLVYEFMKNGSLDKWIFHSYSNRDRLLVWPTRFRIAIATAQG
IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLA
PEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMTCDAEDFFYPGWAYKEMSEGTAEKVV
DRRLEGAMEKEELMRALMVAFWCIQDEVSTRPTMGEVVKMLEGSVDINMPPMPQTVLELI
EEGLDHVYRSMKRELNQFSSFTITTHPSSNATCSYSTMSPR

Transcript Sequence

Gene sequence data has not been registered.